HL_5IT8_129

3D structure

PDB id

5IT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

High-resolution structure of the Escherichia coli ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.12 Å

Loop

Sequence

UUUA

Length

4 nucleotides

Bulged bases

5IT8|1|CA|U|2797

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5IT8_129 not in the Motif Atlas

Geometric match to HL_6U8D_003

Geometric discrepancy: 0.2035

The information below is about HL_6U8D_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32346.4

Basepair signature

cWW-F

Number of instances in this motif group

9

Unit IDs

5IT8|1|CA|U|2796
5IT8|1|CA|U|2797
5IT8|1|CA|U|2798
5IT8|1|CA|A|2799

Current chains

Chain CA

23S rRNA

Nearby chains