HL_5KPX_017
3D structure
- PDB id
- 5KPX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GAUUAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 5KPX|1|26|U|793
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5KPX_017 not in the Motif Atlas
- Homologous match to HL_4LFB_017
- Geometric discrepancy: 0.1205
- The information below is about HL_4LFB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
5KPX|1|26|G|786
5KPX|1|26|A|787
5KPX|1|26|U|788
5KPX|1|26|U|789
5KPX|1|26|A|790
5KPX|1|26|G|791
5KPX|1|26|A|792
5KPX|1|26|U|793
5KPX|1|26|A|794
5KPX|1|26|C|795
5KPX|1|26|C|796
Current chains
- Chain 26
- 16S ribosomal RNA
Nearby chains
- Chain 15
- 30S ribosomal protein S11
- Chain 25
- 30S ribosomal protein S21
- Chain 27
- Large subunit ribosomal RNA; LSU rRNA
- Chain 29
- mRNA
- Chain 31
- Transfer RNA; tRNA
- Chain 32
- Transfer RNA; tRNA
Coloring options: