HL_5LZE_074

3D structure

PDB id

5LZE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CCUUCGGG

Length

8 nucleotides

Bulged bases

5LZE|1|a|U|209, 5LZE|1|a|C|210

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5LZE_074 not in the Motif Atlas

Homologous match to HL_6CZR_076

Geometric discrepancy: 0.5257

The information below is about HL_6CZR_076

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_34168.3

Basepair signature

cWW-cWW-F

Number of instances in this motif group

11

Unit IDs

5LZE|1|a|C|206
5LZE|1|a|C|207
5LZE|1|a|U|208
5LZE|1|a|U|209
5LZE|1|a|C|210
5LZE|1|a|G|211
5LZE|1|a|G|212
5LZE|1|a|G|213

Current chains

Chain a

16S ribosomal RNA

Nearby chains