HL_5LZV_049
3D structure
- PDB id
- 5LZV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian ribosomal termination complex with accommodated eRF1(AAQ) and ABCE1.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.35 Å
Loop
- Sequence
- CGCAGCAG
- Length
- 8 nucleotides
- Bulged bases
- 5LZV|1|5|C|2794, 5LZV|1|5|G|2796, 5LZV|1|5|A|2798
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5LZV_049 not in the Motif Atlas
- Homologous match to HL_5TBW_041
- Geometric discrepancy: 0.1131
- The information below is about HL_5TBW_041
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_56817.1
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
5LZV|1|5|C|2792
5LZV|1|5|G|2793
5LZV|1|5|C|2794
5LZV|1|5|A|2795
5LZV|1|5|G|2796
5LZV|1|5|C|2797
5LZV|1|5|A|2798
5LZV|1|5|G|2799
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain C
- uL4
- Chain P
- uL22
- Chain j
- eL37
- Chain l
- eL39
Coloring options: