HL_5LZW_028
3D structure
- PDB id
- 5LZW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a truncated mRNA.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.53 Å
Loop
- Sequence
- ACGUGCGAAU
- Length
- 10 nucleotides
- Bulged bases
- 5LZW|1|5|U|1596, 5LZW|1|5|A|1600, 5LZW|1|5|A|1601
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5LZW_028 not in the Motif Atlas
- Homologous match to HL_5TBW_020
- Geometric discrepancy: 0.0813
- The information below is about HL_5TBW_020
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_39334.8
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 7
Unit IDs
5LZW|1|5|A|1593
5LZW|1|5|C|1594
5LZW|1|5|G|1595
5LZW|1|5|U|1596
5LZW|1|5|G|1597
5LZW|1|5|C|1598
5LZW|1|5|G|1599
5LZW|1|5|A|1600
5LZW|1|5|A|1601
5LZW|1|5|U|1602
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 1
- Nascent chain
- Chain B
- uL3
- Chain P
- uL22
- Chain j
- eL37
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