HL_5MMI_021

3D structure

PDB id

5MMI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the large subunit of the chloroplast ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGUGAAAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5MMI_021 not in the Motif Atlas

Homologous match to HL_7RQB_022

Geometric discrepancy: 0.4049

The information below is about HL_7RQB_022

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_84085.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

15

Unit IDs

5MMI|1|A|G|723
5MMI|1|A|G|724
5MMI|1|A|U|725
5MMI|1|A|G|726
5MMI|1|A|A|727
5MMI|1|A|A|728
5MMI|1|A|A|729
5MMI|1|A|C|730

Current chains

Chain A

23S ribosomal RNA

Nearby chains