HL_5MRC_086

3D structure

PDB id

5MRC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.25 Å

Loop

Sequence

AUUAAGUU

Length

8 nucleotides

Bulged bases

5MRC|1|aa|G|1141

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5MRC_086 not in the Motif Atlas

Homologous match to HL_5J7L_024

Geometric discrepancy: 0.1762

The information below is about HL_5J7L_024

Detailed Annotation

T-loop related

Broad Annotation

T-loop

Motif group

HL_77436.5

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

5MRC|1|aa|A|1136
5MRC|1|aa|U|1137
5MRC|1|aa|U|1138
5MRC|1|aa|A|1139
5MRC|1|aa|A|1140
5MRC|1|aa|G|1141
5MRC|1|aa|U|1142
5MRC|1|aa|U|1143

Current chains

Chain aa

15S ribosomal RNA

Nearby chains

Chain II

uS9m

Chain ZZ

mS37