HL_5MRF_016
3D structure
- PDB id
- 5MRF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast mitochondrial ribosome - Class C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.97 Å
Loop
- Sequence
- UGUUGCAAUA
- Length
- 10 nucleotides
- Bulged bases
- 5MRF|1|A|U|638, 5MRF|1|A|A|642, 5MRF|1|A|U|643
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5MRF_016 not in the Motif Atlas
- Homologous match to HL_7RQB_023
- Geometric discrepancy: 0.1208
- The information below is about HL_7RQB_023
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_39334.6
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 6
Unit IDs
5MRF|1|A|U|635
5MRF|1|A|G|636
5MRF|1|A|U|637
5MRF|1|A|U|638
5MRF|1|A|G|639
5MRF|1|A|C|640
5MRF|1|A|A|641
5MRF|1|A|A|642
5MRF|1|A|U|643
5MRF|1|A|A|644
Current chains
- Chain A
- 21S ribosomal RNA
Nearby chains
- Chain C
- uL3m
- Chain O
- uL22m
- Chain W
- bL32m
- Chain Y
- bL34m
Coloring options: