HL_5NGM_050
3D structure
- PDB id
- 5NGM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 2.9S structure of the 70S ribosome composing the S. aureus 100S complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CUUAUCG
- Length
- 7 nucleotides
- Bulged bases
- 5NGM|1|AA|U|2238, 5NGM|1|AA|U|2240
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5NGM_050 not in the Motif Atlas
- Homologous match to HL_5J7L_185
- Geometric discrepancy: 0.1095
- The information below is about HL_5J7L_185
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_49922.4
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
5NGM|1|AA|C|2236
5NGM|1|AA|U|2237
5NGM|1|AA|U|2238
5NGM|1|AA|A|2239
5NGM|1|AA|U|2240
5NGM|1|AA|C|2241
5NGM|1|AA|G|2242
Current chains
- Chain AA
- 23S Ribosomal RNA
Nearby chains
- Chain AC
- 50S ribosomal protein L2
Coloring options: