HL_5NGM_072
3D structure
- PDB id
- 5NGM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 2.9S structure of the 70S ribosome composing the S. aureus 100S complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GGAAAC
- Length
- 6 nucleotides
- Bulged bases (A, C, G, U)
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5NGM_072 not in the Motif Atlas
- Homologous match to HL_5J7L_003
- Geometric discrepancy: 0.4368
- The information below is about HL_5J7L_003
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_85603.1
- Basepair signature
- cWW-tSH-F-F
- Number of instances in this motif group
- 304
Unit IDs
5NGM|1|Aa|G|158
5NGM|1|Aa|G|159
5NGM|1|Aa|A|160
5NGM|1|Aa|A|161
5NGM|1|Aa|A|162
5NGM|1|Aa|C|163
Current chains
- Chain Aa
- 16S ribosomal RNA
Nearby chains
- Chain AN
- 50S ribosomal protein L19
- Chain At
- 30S ribosomal protein S20
Coloring options: