HL_5NWY_069
3D structure
- PDB id
- 5NWY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CGAAAG
- Length
- 6 nucleotides
- Bulged bases (A, C, G, U)
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5NWY_069 not in the Motif Atlas
- Homologous match to HL_5J7L_167
- Geometric discrepancy: 0.0727
- The information below is about HL_5J7L_167
- Detailed Annotation
- Other HL
- Broad Annotation
- Other HL
- Motif group
- HL_87030.3
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 30
Unit IDs
5NWY|1|N|C|1363
5NWY|1|N|G|1364
5NWY|1|N|A|1365
5NWY|1|N|A|1366
5NWY|1|N|A|1367
5NWY|1|N|G|1368
Current chains
- Chain N
- 23S rRNA
Nearby chains
- Chain k
- 50S ribosomal protein L28
- Chain p
- 50S ribosomal protein L34
Coloring options: