HL_5O61_007

3D structure

PDB id

5O61 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The complete structure of the Mycobacterium smegmatis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.31 Å

Loop

Sequence

CAAAAUG

Length

7 nucleotides

Bulged bases

5O61|1|A|U|229

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5O61_007 not in the Motif Atlas

Homologous match to HL_4WF9_007

Geometric discrepancy: 0.291

The information below is about HL_4WF9_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_51020.2

Basepair signature

cWW-cSW-F

Number of instances in this motif group

14

Unit IDs

5O61|1|A|C|224
5O61|1|A|A|225
5O61|1|A|A|226
5O61|1|A|A|227
5O61|1|A|A|228
5O61|1|A|U|229
5O61|1|A|G|230

Current chains

Chain A

23S rRNA

Nearby chains