HL_5O61_082
3D structure
- PDB id
- 5O61 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The complete structure of the Mycobacterium smegmatis 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.31 Å
Loop
- Sequence
- GGUGAUGGC
- Length
- 9 nucleotides
- Bulged bases
- 5O61|1|BA|G|266
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5O61_082 not in the Motif Atlas
- Homologous match to HL_5J7L_006
- Geometric discrepancy: 0.1389
- The information below is about HL_5J7L_006
- Detailed Annotation
- GNRA related
- Broad Annotation
- GNRA related
- Motif group
- HL_84299.4
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
5O61|1|BA|G|259
5O61|1|BA|G|260
5O61|1|BA|U|261
5O61|1|BA|G|262
5O61|1|BA|A|263
5O61|1|BA|U|264
5O61|1|BA|G|265
5O61|1|BA|G|266
5O61|1|BA|C|267
Current chains
- Chain BA
- 16S rRNA
Nearby chains
- Chain BQ
- 30S ribosomal protein S17
- Chain BT
- 30S ribosomal protein S20
Coloring options: