HL_5O61_090

3D structure

PDB id

5O61 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The complete structure of the Mycobacterium smegmatis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.31 Å

Loop

Sequence

GCUUAAC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5O61_090 not in the Motif Atlas

Homologous match to HL_5J7L_014

Geometric discrepancy: 0.1295

The information below is about HL_5J7L_014

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_10453.3

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

5O61|1|BA|G|597
5O61|1|BA|C|598
5O61|1|BA|U|599
5O61|1|BA|U|600
5O61|1|BA|A|601
5O61|1|BA|A|602
5O61|1|BA|C|603

Current chains

Chain BA

16S rRNA

Nearby chains

Chain BD

30S ribosomal protein S4

Chain BP

30S ribosomal protein S16