HL_5O61_106
3D structure
- PDB id
- 5O61 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The complete structure of the Mycobacterium smegmatis 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.31 Å
Loop
- Sequence
- GAUCAGCAACGC
- Length
- 12 nucleotides
- Bulged bases
- 5O61|1|BA|A|1345, 5O61|1|BA|C|1347
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5O61_106 not in the Motif Atlas
- Homologous match to HL_4LFB_030
- Geometric discrepancy: 0.0963
- The information below is about HL_4LFB_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_86432.1
- Basepair signature
- cWW-tWH-tWH-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
5O61|1|BA|G|1338
5O61|1|BA|A|1339
5O61|1|BA|U|1340
5O61|1|BA|C|1341
5O61|1|BA|A|1342
5O61|1|BA|G|1343
5O61|1|BA|C|1344
5O61|1|BA|A|1345
5O61|1|BA|A|1346
5O61|1|BA|C|1347
5O61|1|BA|G|1348
5O61|1|BA|C|1349
Current chains
- Chain BA
- 16S rRNA
Nearby chains
- Chain BC
- 30S ribosomal protein S3
- Chain BI
- 30S ribosomal protein S9
- Chain BJ
- 30S ribosomal protein S10
- Chain BM
- 30S ribosomal protein S13
- Chain BN
- 30S ribosomal protein S14 type Z
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