HL_5OA3_026
3D structure
- PDB id
- 5OA3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 40S-eIF2D-re-initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- GACUCAACAC
- Length
- 10 nucleotides
- Bulged bases
- 5OA3|1|2|A|1253
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5OA3_026 not in the Motif Atlas
- Homologous match to HL_4V88_212
- Geometric discrepancy: 0.2347
- The information below is about HL_4V88_212
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50779.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
5OA3|1|2|G|1245
5OA3|1|2|A|1246
5OA3|1|2|C|1247
5OA3|1|2|U|1248
5OA3|1|2|C|1249
5OA3|1|2|A|1250
5OA3|1|2|A|1251
5OA3|1|2|C|1252
5OA3|1|2|A|1253
5OA3|1|2|C|1254
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain 1
- Transfer RNA; tRNA
- Chain P
- 40S ribosomal protein S15
- Chain Q
- 40S ribosomal protein S16
- Chain U
- 40S ribosomal protein S20
- Chain d
- 40S ribosomal protein S29
- Chain f
- Ribosomal protein S27a
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