HL_5OOL_008
3D structure
- PDB id
- 5OOL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.06 Å
Loop
- Sequence
- UGUAGCAAAA
- Length
- 10 nucleotides
- Bulged bases
- 5OOL|1|A|A|1957, 5OOL|1|A|A|1961
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5OOL_008 not in the Motif Atlas
- Homologous match to HL_7RQB_023
- Geometric discrepancy: 0.0985
- The information below is about HL_7RQB_023
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_39334.6
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 6
Unit IDs
5OOL|1|A|U|1954
5OOL|1|A|G|1955
5OOL|1|A|U|1956
5OOL|1|A|A|1957
5OOL|1|A|G|1958
5OOL|1|A|C|1959
5OOL|1|A|A|1960
5OOL|1|A|A|1961
5OOL|1|A|A|1962
5OOL|1|A|A|1963
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain 2
- 39S ribosomal protein L34, mitochondrial
- Chain E
- 39S ribosomal protein L3, mitochondrial
- Chain T
- 39S ribosomal protein L22, mitochondrial
Coloring options: