HL_5OT7_017
3D structure
- PDB id
- 5OT7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongation factor G-ribosome complex captures in the absence of inhibitors.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GAUUAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 5OT7|1|1|U|793
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5OT7_017 not in the Motif Atlas
- Homologous match to HL_6CZR_088
- Geometric discrepancy: 0.3361
- The information below is about HL_6CZR_088
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.4
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
5OT7|1|1|G|786
5OT7|1|1|A|787
5OT7|1|1|U|788
5OT7|1|1|U|789
5OT7|1|1|A|790
5OT7|1|1|G|791
5OT7|1|1|A|792
5OT7|1|1|U|793
5OT7|1|1|A|794
5OT7|1|1|C|795
5OT7|1|1|C|796
Current chains
- Chain 1
- 16S Ribosomal RNA
Nearby chains
- Chain 2
- Transfer RNA; tRNA
- Chain 3
- mRNA
- Chain 4
- Large subunit ribosomal RNA; LSU rRNA
- Chain J
- 30S ribosomal protein S11
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