HL_5OT7_034
3D structure
- PDB id
- 5OT7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongation factor G-ribosome complex captures in the absence of inhibitors.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GGAUUGAAAAUCCC
- Length
- 14 nucleotides
- Bulged bases
- 5OT7|1|2|G|34, 5OT7|1|2|A|35
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5OT7_034 not in the Motif Atlas
- Geometric match to HL_8C3A_054
- Geometric discrepancy: 0.1529
- The information below is about HL_8C3A_054
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_71121.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 24
Unit IDs
5OT7|1|2|G|29
5OT7|1|2|G|30
5OT7|1|2|A|31
5OT7|1|2|U|32
5OT7|1|2|U|33
5OT7|1|2|G|34
5OT7|1|2|A|35
5OT7|1|2|A|36
5OT7|1|2|A|37
5OT7|1|2|A|38
5OT7|1|2|U|39
5OT7|1|2|C|40
5OT7|1|2|C|41
5OT7|1|2|C|42
Current chains
- Chain 2
- tRNA-Phe
Nearby chains
- Chain 1
- Small subunit ribosomal RNA; SSU rRNA
- Chain 3
- mRNA
- Chain 4
- Large subunit ribosomal RNA; LSU rRNA
- Chain H
- 30S ribosomal protein S9
- Chain L
- 30S ribosomal protein S13
- Chain R
- 30S ribosomal protein S19
- Chain U
- Elongation factor G
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