HL_5T7V_021

3D structure

PDB id

5T7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUUAAGUC

Length

8 nucleotides

Bulged bases

5T7V|1|A|G|1105

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5T7V_021 not in the Motif Atlas

Homologous match to HL_5J7L_024

Geometric discrepancy: 0.5637

The information below is about HL_5J7L_024

Detailed Annotation

T-loop related

Broad Annotation

T-loop

Motif group

HL_77436.5

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

5T7V|1|A|G|1100
5T7V|1|A|U|1101
5T7V|1|A|U|1102
5T7V|1|A|A|1103
5T7V|1|A|A|1104
5T7V|1|A|G|1105
5T7V|1|A|U|1106
5T7V|1|A|C|1107

Current chains

Chain A

16S ribosomal RNA

Nearby chains