HL_5T7V_060

3D structure

PDB id

5T7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGACAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5T7V_060 not in the Motif Atlas

Homologous match to HL_5J7L_167

Geometric discrepancy: 0.1634

The information below is about HL_5J7L_167

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

5T7V|1|B|C|1400
5T7V|1|B|G|1401
5T7V|1|B|A|1402
5T7V|1|B|C|1403
5T7V|1|B|A|1404
5T7V|1|B|G|1405

Current chains

Chain B

23S ribosomal RNA

Nearby chains

Chain LA

50S ribosomal protein L28

Chain LG

50S ribosomal protein L34