HL_5TBW_237
3D structure
- PDB id
- 5TBW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- AGUAACUAUGACU
- Length
- 13 nucleotides
- Bulged bases
- 5TBW|1|AR|A|2256
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5TBW_237 not in the Motif Atlas
- Homologous match to HL_8P9A_160
- Geometric discrepancy: 0.0832
- The information below is about HL_8P9A_160
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_70658.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
5TBW|1|AR|A|2252
5TBW|1|AR|G|2253
5TBW|1|AR|U|2254
5TBW|1|AR|A|2255
5TBW|1|AR|A|2256
5TBW|1|AR|C|2257
5TBW|1|AR|U|2258
5TBW|1|AR|A|2259
5TBW|1|AR|U|2260
5TBW|1|AR|G|2261
5TBW|1|AR|A|2262
5TBW|1|AR|C|2263
5TBW|1|AR|U|2264
Current chains
- Chain AR
- 25S ribosomal RNA
Nearby chains
- Chain e0
- 40S ribosomal protein S30-A
- Chain sR
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: