HL_5TCU_017
3D structure
- PDB id
- 5TCU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Methicillin sensitive Staphylococcus aureus 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GAAGCAACGC
- Length
- 10 nucleotides
- Bulged bases
- 5TCU|1|A|G|981
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5TCU_017 not in the Motif Atlas
- Homologous match to HL_5J7L_021
- Geometric discrepancy: 0.5004
- The information below is about HL_5J7L_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50779.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
5TCU|1|A|G|973
5TCU|1|A|A|974
5TCU|1|A|A|975
5TCU|1|A|G|976
5TCU|1|A|C|977
5TCU|1|A|A|978
5TCU|1|A|A|979
5TCU|1|A|C|980
5TCU|1|A|G|981
5TCU|1|A|C|982
Current chains
- Chain A
- 16S RRNA
Nearby chains
- Chain E
- Transfer RNA; tRNA
- Chain S1
- 30S ribosomal protein S10
- Chain SH
- 30S ribosomal protein S9
Coloring options: