HL_5TCU_037

3D structure

PDB id

5TCU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin sensitive Staphylococcus aureus 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GCUUGC

Length

6 nucleotides

Bulged bases

5TCU|1|B|U|286

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5TCU_037 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.3843

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40612.1

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

5TCU|1|B|G|283
5TCU|1|B|C|284
5TCU|1|B|U|285
5TCU|1|B|U|286
5TCU|1|B|G|287
5TCU|1|B|C|288

Current chains

Chain B

23S RRNA

Nearby chains