HL_5TCU_069
3D structure
- PDB id
- 5TCU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Methicillin sensitive Staphylococcus aureus 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- UUUAUCAAAAA
- Length
- 11 nucleotides
- Bulged bases
- 5TCU|1|B|A|1807, 5TCU|1|B|U|1808, 5TCU|1|B|C|1809, 5TCU|1|B|A|1813
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5TCU_069 not in the Motif Atlas
- Homologous match to HL_4WF9_043
- Geometric discrepancy: 0.1781
- The information below is about HL_4WF9_043
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87681.1
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
5TCU|1|B|U|1804
5TCU|1|B|U|1805
5TCU|1|B|U|1806
5TCU|1|B|A|1807
5TCU|1|B|U|1808
5TCU|1|B|C|1809
5TCU|1|B|A|1810
5TCU|1|B|A|1811
5TCU|1|B|A|1812
5TCU|1|B|A|1813
5TCU|1|B|A|1814
Current chains
- Chain B
- 23S RRNA
Nearby chains
- Chain L2
- 50S ribosomal protein L2
- Chain LG
- 50S ribosomal protein L34
Coloring options: