HL_5UZ4_021
3D structure
- PDB id
- 5UZ4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The cryo-EM structure of YjeQ bound to the 30S subunit suggests a fidelity checkpoint function for this protein in ribosome assembly
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.8 Å
Loop
- Sequence
- CGAUGCAACGCG
- Length
- 12 nucleotides
- Bulged bases
- 5UZ4|1|A|G|971
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5UZ4_021 not in the Motif Atlas
- Geometric match to HL_8KAH_003
- Geometric discrepancy: 0.2932
- The information below is about HL_8KAH_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_89457.1
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
5UZ4|1|A|C|962
5UZ4|1|A|G|963
5UZ4|1|A|A|964
5UZ4|1|A|U|965
5UZ4|1|A|G|966
5UZ4|1|A|C|967
5UZ4|1|A|A|968
5UZ4|1|A|A|969
5UZ4|1|A|C|970
5UZ4|1|A|G|971
5UZ4|1|A|C|972
5UZ4|1|A|G|973
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain I
- 30S ribosomal protein S9
- Chain J
- 30S ribosomal protein S10
- Chain M
- 30S ribosomal protein S13
- Chain N
- 30S ribosomal protein S14
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