HL_5V7Q_050
3D structure
- PDB id
- 5V7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the large ribosomal subunit from Mycobacterium tuberculosis bound with a potent linezolid analog
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GUAAAGAUGC
- Length
- 10 nucleotides
- Bulged bases
- 5V7Q|1|A|A|2268, 5V7Q|1|A|A|2269, 5V7Q|1|A|G|2270
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5V7Q_050 not in the Motif Atlas
- Homologous match to HL_7RQB_050
- Geometric discrepancy: 0.2017
- The information below is about HL_7RQB_050
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_90642.6
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
5V7Q|1|A|G|2265
5V7Q|1|A|U|2266
5V7Q|1|A|A|2267
5V7Q|1|A|A|2268
5V7Q|1|A|A|2269
5V7Q|1|A|G|2270
5V7Q|1|A|A|2271
5V7Q|1|A|U|2272
5V7Q|1|A|G|2273
5V7Q|1|A|C|2274
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 0
- 50S ribosomal protein L32
- Chain D
- 50S ribosomal protein L3
- Chain R
- LSU ribosomal protein L21p
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