HL_5V7Q_077
3D structure
- PDB id
- 5V7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the large ribosomal subunit from Mycobacterium tuberculosis bound with a potent linezolid analog
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UUUACUAAAAA
- Length
- 11 nucleotides
- Bulged bases
- 5V7Q|1|A|A|2014, 5V7Q|1|A|C|2015, 5V7Q|1|A|U|2016, 5V7Q|1|A|A|2020
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5V7Q_077 not in the Motif Atlas
- Homologous match to HL_4WF9_043
- Geometric discrepancy: 0.227
- The information below is about HL_4WF9_043
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87681.1
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
5V7Q|1|A|U|2011
5V7Q|1|A|U|2012
5V7Q|1|A|U|2013
5V7Q|1|A|A|2014
5V7Q|1|A|C|2015
5V7Q|1|A|U|2016
5V7Q|1|A|A|2017
5V7Q|1|A|A|2018
5V7Q|1|A|A|2019
5V7Q|1|A|A|2020
5V7Q|1|A|A|2021
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 2
- 50S ribosomal protein L34
- Chain C
- 50S ribosomal protein L2
Coloring options: