HL_5WE4_021

3D structure

PDB id

5WE4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu wt complex with GppNHp

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

U(1MG)(PSU)(5MC)GAAAAA

Length

10 nucleotides

Bulged bases

5WE4|1|A|A|751, 5WE4|1|A|A|752

QA status

Modified nucleotides: 1MG, PSU, 5MC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5WE4_021 not in the Motif Atlas

Homologous match to HL_5J7L_155

Geometric discrepancy: 0.0427

The information below is about HL_5J7L_155

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_88205.2

Basepair signature

cWW-cWS-tSW-F-F

Number of instances in this motif group

7

Unit IDs

5WE4|1|A|U|744
5WE4|1|A|1MG|745
5WE4|1|A|PSU|746
5WE4|1|A|5MC|747
5WE4|1|A|G|748
5WE4|1|A|A|749
5WE4|1|A|A|750
5WE4|1|A|A|751
5WE4|1|A|A|752
5WE4|1|A|A|753

Current chains

Chain A

23S rRNA

Nearby chains

Chain 0

50S ribosomal protein L32

Chain 2

50S ribosomal protein L34

Chain D

50S ribosomal protein L3

Chain S

50S ribosomal protein L22