HL_5WE4_064

3D structure

PDB id

5WE4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu wt complex with GppNHp

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

5WE4|1|A|G|2751, 5WE4|1|A|C|2755

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5WE4_064 not in the Motif Atlas

Homologous match to HL_7RQB_066

Geometric discrepancy: 0.1502

The information below is about HL_7RQB_066

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56677.7

Basepair signature

cWW-tWH-tSH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

8

Unit IDs

5WE4|1|A|C|2745
5WE4|1|A|U|2746
5WE4|1|A|G|2747
5WE4|1|A|A|2748
5WE4|1|A|A|2749
5WE4|1|A|A|2750
5WE4|1|A|G|2751
5WE4|1|A|C|2752
5WE4|1|A|A|2753
5WE4|1|A|U|2754
5WE4|1|A|C|2755
5WE4|1|A|U|2756
5WE4|1|A|A|2757
5WE4|1|A|A|2758
5WE4|1|A|G|2759

Current chains

Chain A

23S rRNA

Nearby chains

Chain 4

50S ribosomal protein L36

Chain G

50S ribosomal protein L6

Chain J

50S ribosomal protein L13