HL_5WE6_011

3D structure

PDB id

5WE6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and cognate tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

5WE6|1|A|G|386

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5WE6_011 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.1183

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

5WE6|1|A|A|382
5WE6|1|A|C|383
5WE6|1|A|A|384
5WE6|1|A|C|385
5WE6|1|A|G|386
5WE6|1|A|U|387
5WE6|1|A|G|388
5WE6|1|A|G|389
5WE6|1|A|U|390
5WE6|1|A|A|391
5WE6|1|A|U|392

Current chains

Chain A

23S rRNA

Nearby chains

Chain X

50S ribosomal protein L28

Chain w

Transfer RNA; tRNA