HL_5WF0_011

3D structure

PDB id

5WF0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

5WF0|1|A|G|386, 5WF0|1|A|G|389

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5WF0_011 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.0907

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

5WF0|1|A|A|382
5WF0|1|A|C|383
5WF0|1|A|A|384
5WF0|1|A|C|385
5WF0|1|A|G|386
5WF0|1|A|U|387
5WF0|1|A|G|388
5WF0|1|A|G|389
5WF0|1|A|U|390
5WF0|1|A|A|391
5WF0|1|A|U|392

Current chains

Chain A

23S rRNA

Nearby chains

Chain X

50S ribosomal protein L28

Chain w

Transfer RNA; tRNA