HL_5WFK_064

3D structure

PDB id

5WFK (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

5WFK|1|A|G|2751, 5WFK|1|A|C|2755

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5WFK_064 not in the Motif Atlas

Homologous match to HL_7RQB_066

Geometric discrepancy: 0.161

The information below is about HL_7RQB_066

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56677.7

Basepair signature

cWW-tWH-tSH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

8

Unit IDs

5WFK|1|A|C|2745
5WFK|1|A|U|2746
5WFK|1|A|G|2747
5WFK|1|A|A|2748
5WFK|1|A|A|2749
5WFK|1|A|A|2750
5WFK|1|A|G|2751
5WFK|1|A|C|2752
5WFK|1|A|A|2753
5WFK|1|A|U|2754
5WFK|1|A|C|2755
5WFK|1|A|U|2756
5WFK|1|A|A|2757
5WFK|1|A|A|2758
5WFK|1|A|G|2759

Current chains

Chain A

23S rRNA

Nearby chains

Chain 4

50S ribosomal protein L36

Chain G

50S ribosomal protein L6

Chain J

50S ribosomal protein L13