HL_5WWR_001

3D structure

PDB id

5WWR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of human NSun6/tRNA/SFG

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CAGGGGUAG

Length

9 nucleotides

Bulged bases

5WWR|1|C|G|18, 5WWR|1|C|G|19, 5WWR|1|C|U|20

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5WWR_001 not in the Motif Atlas

Homologous match to HL_5WWT_001

Geometric discrepancy: 0.0581

The information below is about HL_5WWT_001

Detailed Annotation

tRNA D-loop

Broad Annotation

No text annotation

Motif group

HL_45175.1

Basepair signature

cWW-cWS-F-F

Number of instances in this motif group

5

Unit IDs

5WWR|1|C|C|13
5WWR|1|C|A|14
5WWR|1|C|G|15
5WWR|1|C|G|16
5WWR|1|C|G|18
5WWR|1|C|G|19
5WWR|1|C|U|20
5WWR|1|C|A|21
5WWR|1|C|G|22

Current chains

Chain C

tRNA

Nearby chains

Chain A

Putative methyltransferase NSUN6