HL_5ZEP_044

3D structure

PDB id

5ZEP (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis hibernating state 70S ribosome structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AGAGAAU

Length

7 nucleotides

Bulged bases

5ZEP|1|A|A|1852

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5ZEP_044 not in the Motif Atlas

Homologous match to HL_5J7L_174

Geometric discrepancy: 0.1244

The information below is about HL_5J7L_174

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

5ZEP|1|A|A|1848
5ZEP|1|A|G|1849
5ZEP|1|A|A|1850
5ZEP|1|A|G|1851
5ZEP|1|A|A|1852
5ZEP|1|A|A|1853
5ZEP|1|A|U|1854

Current chains

Chain A

23S rRNA

Nearby chains