HL_5ZEP_091
3D structure
- PDB id
- 5ZEP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. smegmatis hibernating state 70S ribosome structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GAUUAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 5ZEP|1|a|U|773
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5ZEP_091 not in the Motif Atlas
- Homologous match to HL_5J7L_017
- Geometric discrepancy: 0.1307
- The information below is about HL_5J7L_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
5ZEP|1|a|G|766
5ZEP|1|a|A|767
5ZEP|1|a|U|768
5ZEP|1|a|U|769
5ZEP|1|a|A|770
5ZEP|1|a|G|771
5ZEP|1|a|A|772
5ZEP|1|a|U|773
5ZEP|1|a|A|774
5ZEP|1|a|C|775
5ZEP|1|a|C|776
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain k
- 30S ribosomal protein S11
- Chain w
- Transfer RNA; tRNA
- Chain x
- Ribosome hibernation promoting factor
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