HL_5ZEU_017

3D structure

PDB id

5ZEU (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis P/P state 30S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GAUUAGAUACC

Length

11 nucleotides

Bulged bases

5ZEU|1|a|U|773

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5ZEU_017 not in the Motif Atlas

Homologous match to HL_5J7L_017

Geometric discrepancy: 0.1307

The information below is about HL_5J7L_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.5

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

5ZEU|1|a|G|766
5ZEU|1|a|A|767
5ZEU|1|a|U|768
5ZEU|1|a|U|769
5ZEU|1|a|A|770
5ZEU|1|a|G|771
5ZEU|1|a|A|772
5ZEU|1|a|U|773
5ZEU|1|a|A|774
5ZEU|1|a|C|775
5ZEU|1|a|C|776

Current chains

Chain a

16S rRNA

Nearby chains

Chain k

30S ribosomal protein S11

Chain v

Transfer RNA; tRNA