HL_5ZLU_024

3D structure

PDB id

5ZLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome Structure bound to ABC-F protein.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GAAGCAACGC

Length

10 nucleotides

Bulged bases

5ZLU|1|G|G|971

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5ZLU_024 not in the Motif Atlas

Homologous match to HL_4LFB_021

Geometric discrepancy: 0.1715

The information below is about HL_4LFB_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50779.4

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

4

Unit IDs

5ZLU|1|G|G|963
5ZLU|1|G|A|964
5ZLU|1|G|A|965
5ZLU|1|G|G|966
5ZLU|1|G|C|967
5ZLU|1|G|A|968
5ZLU|1|G|A|969
5ZLU|1|G|C|970
5ZLU|1|G|G|971
5ZLU|1|G|C|972

Current chains

Chain G

16S ribosomal RNA

Nearby chains

Chain DD

Transfer RNA; tRNA

Chain E

30S ribosomal protein S10

Chain O

30S ribosomal protein S9