HL_5ZLU_063

3D structure

PDB id

5ZLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome Structure bound to ABC-F protein.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

5ZLU|1|V|A|1070

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5ZLU_063 not in the Motif Atlas

Geometric match to HL_8C3A_039

Geometric discrepancy: 0.3804

The information below is about HL_8C3A_039

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

5ZLU|1|V|C|1064
5ZLU|1|V|U|1065
5ZLU|1|V|U|1066
5ZLU|1|V|A|1067
5ZLU|1|V|G|1068
5ZLU|1|V|A|1069
5ZLU|1|V|A|1070
5ZLU|1|V|G|1071
5ZLU|1|V|C|1072
5ZLU|1|V|A|1073
5ZLU|1|V|G|1074

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain BB

50S ribosomal protein L36

Chain e

50S ribosomal protein L10

Chain f

50S ribosomal protein L11