HL_5ZLU_066

3D structure

PDB id

5ZLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome Structure bound to ABC-F protein.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CCCGCGAG

Length

8 nucleotides

Bulged bases

5ZLU|1|V|G|1224

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5ZLU_066 not in the Motif Atlas

Geometric match to HL_8KAH_003

Geometric discrepancy: 0.3134

The information below is about HL_8KAH_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_89457.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

2

Unit IDs

5ZLU|1|V|C|1221
5ZLU|1|V|C|1222
5ZLU|1|V|C|1223
5ZLU|1|V|G|1224
5ZLU|1|V|C|1225
5ZLU|1|V|G|1226
5ZLU|1|V|A|1227
5ZLU|1|V|G|1228

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain n

50S ribosomal protein L20

Chain o

50S ribosomal protein L21