HL_5ZLU_095

3D structure

PDB id

5ZLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome Structure bound to ABC-F protein.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUGUUCG

Length

7 nucleotides

Bulged bases

5ZLU|1|V|U|2552

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5ZLU_095 not in the Motif Atlas

Homologous match to HL_5J7L_195

Geometric discrepancy: 0.2231

The information below is about HL_5J7L_195

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_30068.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

5ZLU|1|V|C|2551
5ZLU|1|V|U|2552
5ZLU|1|V|G|2553
5ZLU|1|V|U|2554
5ZLU|1|V|U|2555
5ZLU|1|V|C|2556
5ZLU|1|V|G|2557

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain EE

Macrolide efflux protein