HL_5ZLU_109

3D structure

PDB id

5ZLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome Structure bound to ABC-F protein.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGGGUGAAAGCCUG

Length

14 nucleotides

Bulged bases

5ZLU|1|G|G|1013

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5ZLU_109 not in the Motif Atlas

Homologous match to HL_5J7L_022

Geometric discrepancy: 0.4687

The information below is about HL_5J7L_022

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_06285.3

Basepair signature

cWW-cWW-F-F-tSH-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

5ZLU|1|G|C|1008
5ZLU|1|G|G|1009
5ZLU|1|G|G|1010
5ZLU|1|G|G|1011
5ZLU|1|G|U|1012
5ZLU|1|G|G|1013
5ZLU|1|G|A|1014
5ZLU|1|G|A|1015
5ZLU|1|G|A|1016
5ZLU|1|G|G|1017
5ZLU|1|G|C|1018
5ZLU|1|G|C|1019
5ZLU|1|G|U|1020
5ZLU|1|G|G|1021

Current chains

Chain G

16S ribosomal RNA

Nearby chains

Chain D

30S ribosomal protein S19

Chain S

30S ribosomal protein S14 type Z