HL_6AWC_015

3D structure

PDB id

6AWC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of 30S ribosomal subunit and RNA polymerase complex in rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

7.9 Å

Loop

Sequence

CGGUGAAAUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6AWC_015 not in the Motif Atlas

Homologous match to HL_6CZR_086

Geometric discrepancy: 0.2811

The information below is about HL_6CZR_086

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.4

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

13

Unit IDs

6AWC|1|A|C|689
6AWC|1|A|G|690
6AWC|1|A|G|691
6AWC|1|A|U|692
6AWC|1|A|G|693
6AWC|1|A|A|694
6AWC|1|A|A|695
6AWC|1|A|A|696
6AWC|1|A|U|697
6AWC|1|A|G|698

Current chains

Chain A

16S rRNA

Nearby chains

Chain N

30S ribosomal protein S11