HL_6AWC_018
3D structure
- PDB id
- 6AWC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of 30S ribosomal subunit and RNA polymerase complex in rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7.9 Å
Loop
- Sequence
- CCUUGAG
- Length
- 7 nucleotides
- Bulged bases
- 6AWC|1|A|C|841, 6AWC|1|A|U|842, 6AWC|1|A|U|843, 6AWC|1|A|G|844, 6AWC|1|A|A|845
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6AWC_018 not in the Motif Atlas
- Geometric match to HL_8C3A_022
- Geometric discrepancy: 0.3252
- The information below is about HL_8C3A_022
- Detailed Annotation
- Externally structured
- Broad Annotation
- Externally structured
- Motif group
- HL_96426.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 4
Unit IDs
6AWC|1|A|C|840
6AWC|1|A|C|841
6AWC|1|A|U|842
6AWC|1|A|U|843
6AWC|1|A|G|844
6AWC|1|A|A|845
6AWC|1|A|G|846
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 03
- DNA-directed RNA polymerase subunit beta
- Chain 04
- DNA-directed RNA polymerase subunit beta'
- Chain E
- 30S ribosomal protein S2
- Chain U
- 30S ribosomal protein S18
Coloring options: