HL_6AWC_028
3D structure
- PDB id
- 6AWC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of 30S ribosomal subunit and RNA polymerase complex in rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7.9 Å
Loop
- Sequence
- CUGCAACUCG
- Length
- 10 nucleotides
- Bulged bases
- 6AWC|1|A|C|1317, 6AWC|1|A|A|1318
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6AWC_028 not in the Motif Atlas
- Homologous match to HL_5J7L_028
- Geometric discrepancy: 0.2934
- The information below is about HL_5J7L_028
- Detailed Annotation
- T-loop with 3 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_02887.3
- Basepair signature
- cWW-tWH-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
6AWC|1|A|C|1314
6AWC|1|A|U|1315
6AWC|1|A|G|1316
6AWC|1|A|C|1317
6AWC|1|A|A|1318
6AWC|1|A|A|1319
6AWC|1|A|C|1320
6AWC|1|A|U|1321
6AWC|1|A|C|1322
6AWC|1|A|G|1323
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain P
- 30S ribosomal protein S13
- Chain Q
- 30S ribosomal protein S14
- Chain V
- 30S ribosomal protein S19
Coloring options: