HL_6BOH_032
3D structure
- PDB id
- 6BOH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- UGGCUACCUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6BOH_032 not in the Motif Atlas
- Homologous match to HL_7RQB_001
- Geometric discrepancy: 0.093
- The information below is about HL_7RQB_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_99167.2
- Basepair signature
- cWW-F-F-cSH-F-F
- Number of instances in this motif group
- 6
Unit IDs
6BOH|1|B|U|59
6BOH|1|B|G|60
6BOH|1|B|G|61
6BOH|1|B|C|62
6BOH|1|B|U|63
6BOH|1|B|A|64
6BOH|1|B|C|65
6BOH|1|B|C|66
6BOH|1|B|U|67
6BOH|1|B|G|68
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain EA
- 50S ribosomal protein L34
- Chain U
- 50S ribosomal protein L23
- Chain Z
- 50S ribosomal protein L29
Coloring options: