HL_6BY1_102

3D structure

PDB id

6BY1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli pH03H9 complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.94 Å

Loop

Sequence

UGAAAGG

Length

7 nucleotides

Bulged bases

6BY1|1|CA|A|781, 6BY1|1|CA|G|784

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BY1_102 not in the Motif Atlas

Homologous match to HL_7A0S_023

Geometric discrepancy: 0.1699

The information below is about HL_7A0S_023

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_51020.2

Basepair signature

cWW-cSW-F

Number of instances in this motif group

14

Unit IDs

6BY1|1|CA|U|779
6BY1|1|CA|G|780
6BY1|1|CA|A|781
6BY1|1|CA|A|782
6BY1|1|CA|A|783
6BY1|1|CA|G|784
6BY1|1|CA|G|785

Current chains

Chain CA

23S ribosomal RNA

Nearby chains

Chain CC

50S ribosomal protein L2