HL_6BY1_109

3D structure

PDB id

6BY1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli pH03H9 complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.94 Å

Loop

Sequence

CUUAUG

Length

6 nucleotides

Bulged bases

6BY1|1|CA|A|1175

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BY1_109 not in the Motif Atlas

Geometric match to HL_4V88_198

Geometric discrepancy: 0.3138

The information below is about HL_4V88_198

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

6BY1|1|CA|C|1172
6BY1|1|CA|U|1173
6BY1|1|CA|U|1174
6BY1|1|CA|A|1175
6BY1|1|CA|U|1176
6BY1|1|CA|G|1177

Current chains

Chain CA

23S ribosomal RNA

Nearby chains