HL_6BY1_154

3D structure

PDB id

6BY1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli pH03H9 complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.94 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

6BY1|1|DA|A|125

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BY1_154 not in the Motif Atlas

Homologous match to HL_5J7L_136

Geometric discrepancy: 0.1123

The information below is about HL_5J7L_136

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_82710.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

6BY1|1|DA|G|123
6BY1|1|DA|G|124
6BY1|1|DA|A|125
6BY1|1|DA|A|126
6BY1|1|DA|A|127
6BY1|1|DA|C|128

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain D3

50S ribosomal protein L34

Chain DT

50S ribosomal protein L23