HL_6BY1_218

3D structure

PDB id

6BY1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli pH03H9 complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.94 Å

Loop

Sequence

UUUA

Length

4 nucleotides

Bulged bases

6BY1|1|DA|U|2797

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BY1_218 not in the Motif Atlas

Geometric match to HL_6U8D_003

Geometric discrepancy: 0.2549

The information below is about HL_6U8D_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32346.5

Basepair signature

cWW-F

Number of instances in this motif group

10

Unit IDs

6BY1|1|DA|U|2796
6BY1|1|DA|U|2797
6BY1|1|DA|U|2798
6BY1|1|DA|A|2799

Current chains

Chain DA

23S ribosomal RNA

Nearby chains